Zaloni Platform Administrator
New project requirement for building Zaloni Cluster for GHR
Skilled in at least a few of the following technologies:
o Zaloni development or Admin
o Databases: Oracle, SQL Server or other non-relational Database
o Knowledge on Hadoop
o Apache Kafka, Apache Storm, Apache Spark.
o Familiarity of deploying applications with container technology (Docker, Kubernetes, etc.)
Critical Skills/Niche Skills: Zaloni Admin
Experience Level: 5 to 7 years
Job Type: Contract
Benefits:
Schedule:
COVID-19 considerations:
Applicant will be working remotely until Organization's decision to return to work at the Jersey City, NJ office. Return to office date is unknown.
Experience:
Work authorization:
Contract Renewal:
Full Time Opportunity:
Company's website:
Work Remotely:
Bioinformatics Data Engineer
The mission of the Allen Institute is to unlock the complexities of bioscience and advance our knowledge to improve human health. Using an open science, multi-scale, team-oriented approach, the Allen Institute focuses on accelerating foundational research, developing standards and models, and cultivating new ideas to make a broad, transformational impact on science.
The goal of the Allen Institute for Immunology is to advance the fundamental understanding of human immunology through the study of immune health and disease where excessive or impaired immune responses drive pathological processes.
The Allen Institute for Immunology is seeking a Bioinformatics Data Engineer (Data Scientist) with broad experience in developing computer codes/scripts to automate the analysis of omics data, especially next generation sequencing (NGS) data, to join our Informatics and Computational Biology team.
You will be part of a multidisciplinary team and will be responsible for (i) development and implementation of data processing and analysis software as needed, (ii) assisting in both pipeline and exploratory analysis of data from diverse assays and sample types, (iii) working towards visualizations and reports for internal and external dissemination. As such, ideal candidates should have a good understanding of sequencing technologies, and a proven track record of development of analytical software packages. This role includes analysis and integration of “big data” types, and working in close collaboration with the software development team for deployment on our interactive cloud environment to ensure user accessibility and generation of actionable insights. You will also support technology development projects in collaboration with the Molecular Biology and Immunology teams.
Good judgment and problem-solving skills are required for recognizing anomalous data, identifying and fixing code bugs and participating in data-driven algorithm design and improvement. A successful candidate will have demonstrated success in big data science, code optimization and deployment. The Bioinformatics Data Engineer must have excellent attention to detail and the eagerness to work in a team science, deadline-driven atmosphere.
Essential Functions
Design and develop software programs to optimize scRNA-seq, scATAC-seq & CITE-seq processing pipelines and analysis algorithms including PCA and dimensionality reduction
Deploy automated pipelines in our interactive cloud environment with graphical user interface to facilitate user accessibility
Publish codebase or software as part of high impact publications or releases
Integrate multiple data streams for “Big Data” analysis (examples include scRNA-seq, scATAC-seq, flow cytometry, WGS)
Generate interactive data visualizations and work with end users to identify actionable insights
Exploratory data mining
Meet production deadlines for data analysis and be able to pivot between multiple projects
Required Qualifications
Bachelor's degree in a big data computational field (e.g., Bioinformatics, Computer Science, Biostatistics, Physics, Mathematics) with a minimum of 2 years experience in analyzing omics data.
Demonstrated success in a multidisciplinary team environment.
Good understanding of sequencing technologies, data processing and integrative analysis
Fluency in Java, Python, R and Unix shell scripting.
Experience in Big Data analysis, code optimization & parallel programming. Proven experience with big data analysis technical and languages such as Apache Spark, BigTable, Scala or Rust.
Good knowledge of version control systems such as Git
Strong organizational, teamwork, and communication skills
Attention to detail, and good problem-solving skills
Preferred Qualifications
Masters or PhD in Bioinformatics/Computational Biology or similar
Familiarity with immunology
Understanding of Flow Cytometry and CyTOF analysis a plus
Familiarity with cloud computing
Ability to implement, test, and share new computational tools quickly, in an iterative manner, after feedback from experimental, data production, and analysis teams
Excellent work ethic displayed as a reliable, self-motivated, enthusiastic team player
Ability to learn new programming languages and packages
Eager to learn new skills
Work Environment
Working at a computer and using a mouse for extended periods of time
May need to work outside of standard working hours at times
Travel
Some travel may be required
Additional Details:
This role is currently able to work remotely full-time, this may change and you may be required to work onsite as safety restrictions are lifted in relation to Covid-19. You must be a Washington State resident to work remotely.
We are open to full-time, part-time, and/or contract work for this role. When you apply, please specify which work arrangement you desire. We are flexible.
Additional Comments
**Please note, this opportunity does sponsor work visas**
**Please note, this opportunity offers relocation assistance**
We are looking for strong Data Engineers, skilled in Hadoop, Scala, Spark, Kafka, Python, and AWS. I've included the job description below.
Here is what we are looking for:
Overall Responsibility:
Basic Qualifications:
Preferred Qualifications:
Job Type: Contract
Schedule:
Experience:
Contract Renewal:
Full Time Opportunity:
Work Location:
Work Remotely:
Our fortune client is looking for a talented Solutions Engineer.. This is one of our top clients and we have been successful in building out entire teams for this organization. This role will be temp to permanent, 40 hours/week, paid on an hourly rate plus very highly subsidized benefits. This role will start working remotely but after Covid restrictions are lifted, the goal is to have this person onsite in Hartford CT
Deliverables:
Tools involved:
Java based web services APIs and python clients.
Job Types: Full-time, Contract
Pay: $62.00 - $68.00 per hour
Experience:
Work Remotely: